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Applied Physics

EPJE: New section about tips and tricks in soft matter and biological physics

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EPJE Associate Editors Kari Dalnoki-Veress and James A. Forrest open the journal for submissions of a new type of paper: Tips and Tricks.

Underpinning the scientific enterprise there is often some crucial numerical recipe, a sample cell configuration, a sample preparation method, or experimental design. In some cases more emails were shared describing a trick than citations gathered by the paper where a brief description was provided. Typically such details are only briefly described in the journal literature, passed only from student to student, or simply shared as a ‘personal communication’. Sometimes such enabling techniques are not passed on at all. In all such cases, the scientific community as a whole is missing out, lacking a way to document this knowledge and to build on it. Moreover, while the specific research of some team may not be directly relevant to another, a transformative computational or experimental methodology can form the commonality between researchers working in different fields.

2015 will see the launch of a new section of EPJ E: Tips and Tricks.

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EPJ E Highlight - How do vertebrates take on their form?

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Modeling of the fold formation mechanism. A sheet of rubber on which a (stiffer) paper label is stuck buckles along the boundary between the stiff zone and the soft zone when it is stretched. This reproduces the formation of folds along the boundaries between cellular domains. © VF-CNRS-MSC/EDP Sciences-SIF-Springer SBM

A simple physical mechanism that can be assimilated to folding, or buckling, means that an unformed mass of cells can change in a single step into an embryo organized as a typical vertebrate. This is the main conclusion of work by a team involving physicists from the Laboratoire Matière et Systèmes Complexes (CNRS/Université Paris Diderot) and a biologist from the Laboratoire de Biologie du Développement (CNRS/UPMC).

Thanks to microscopic observations and micromechanical experiments, the scientists have discovered that the pattern that guides this folding is present from the early stages of development. The folds that will give a final shape to the animal form along the boundaries between cell territories with different properties. This work has shed light on the mechanism for the formation of vertebrates and thus how they appeared during evolution. These findings have just been published in EPJ E.

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EPJ E Highlight - Optical manipulation of particles of all shapes and sizes

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Ellipsoidal particle levitating at the optical beam waist, with its long axis aligned to the beam axis. © B. M. Mihiretie et al.

A new study of how particles may respond to the mechanical effects of light helps improve optical manipulation and remote sensing of non-spherical particles.

Manipulation of small objects by light has gained in popularity in the past few years. Now, scientists have performed the first systematic analysis of the behaviour of ellipsoidal particles manipulated by laser beams. The work shows that such particles are constantly moving in and out of the reach of an optical beam, creating oscillations. These findings by a team of researchers from the University of Bordeaux, France, have just been published in EPJ E. This work could help understand the unusual behaviour of rod-like particles manipulated by optical tweezers. Ultimately, the theoretical part of this work could contribute numerical models of how complicated shapes and large sizes scatter laser light. Numerous applications exist in fluid engineering and remote sensing methods.

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EPJE: Francesco Sciortino joins the EPJE board as Editor in Chief

After five years of impeccable service as Editor-in-Chief of the soft matter part, EPJ E must say thank you and goodbye to Professor Daan Frenkel, as part of the journal’s process of continuous renewal. We are delighted to announce the arrival of his successor as of January 1st 2015: Professor Francesco Sciortino of the University of Rome La Sapienza. Sciortino started his scientific career with an experimental PhD on the phase behavior of biopolymers solutions at the University of Palermo, and shortly after moved on to numerical simulation methods in which he has become a renowned expert. He has held various appointments through the years in Boston, Cagliari, Bordeaux, Western Ontario, and Paris. His research interests are varied and include: self-assembly in colloidal systems and protein solutions, bio-functionalized colloids, aggregation phenomena in colloidal systems, cluster phases and gels, thermodynamics of anomalous liquids, thermodynamics of supercooled liquids and their glass transition, percolation and phase transitions in complex liquids. We wish Francesco Sciortino great success as EPJE EiC, in connecting the journal with the soft matter community to EPJE. Daan Frenkel will continue to sit on the journal Advisory Board.

EPJ E Highlight - Biomimetic dew harvesters

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A preserved specimen of the Tenebrionind beetle (Physasterna cribripes) was used for this study, displaying the insect’s mechanisms of dew harvesting. © J.M. Guadarrama-Cetina et al.

Understanding how a desert beetle harvests water from dew could help to improve drinking water collection in dew condensers mimicking the nanostructure of the beetle’s back

Insects are full of marvels—and this is certainly the case with a beetle from the Tenebrionind family, found in the extreme conditions of the Namib desert. Now, a team of scientists has demonstrated that such insects can collect dew on their backs—and not just fog as previously thought. This is made possible by the wax nanostructure on the surface of the beetle’s elytra. These findings by José Guadarrama-Cetina, then working at ESPCI ParisTech, France—on leave from the University of Navarra, in Spain—and colleagues were recently published in EPJ E. They bring us a step closer to harvesting dew to make drinking water from the humidity in the air. This, the team hopes, can be done by improving the water yield of man-made dew condensers that mimick the nanostructure on the beetle’s back.

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EPJ E Highlight - Ion adsorption matter in biology

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New systematic study of the electrical properties of model lipid membranes could improve our understanding of biological cells and opens new possibilities for medical diagnostics

Biological membranes are mainly composed of lipid bilayers. Gaining a better understanding of adsorption of solution ions onto lipid membranes helps clarify functional processes in biological cells. Now, a new study provides a quantitative description of the equilibria between lipid membranes and surrounding solution ions. Joanna Kotyńska and Zbigniew Figaszewski from the University of Bialystok, Poland, are the authors of a study describing these findings, just published in EPJ E. In addition to shedding some light on biological processes, these results could also have implications for, among other things, the future development of medical diagnostics.

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EPJ E Highlight - Thermodiffusion in weightlessness

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Flow pattern 2 min after the start of vibrations. © Y. Gaponenko et al.

Zero gravity experiments on the International Space Station shed some light on thermodiffusion effects, relevant to the oil and gas industry and global warming prevention processes

Thermodiffusion, also called the Soret effect, is a mechanism by which an imposed temperature difference establishes a concentration difference within a mixture. Two studies by Belgian scientists from the Free University of Brussels, recently published in EPJ E, provide a better understanding of such effects. They build on recent experimental results from the IVIDIL—Influence Vibration on Diffusion in Liquids—research project performed on the International Space Station under microgravity to avoid motion in the liquids.

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EPJ E Highlight - Optimum inertial self-propulsion design for snowman-like nanorobot

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Streamlines, velocity field, and magnitude of the share of the propelling flow attributed to the low level inertial force, in the case of touching spheres. © Nadal et al.

A new study investigates the effects of small but finite inertia on the propulsion of micro and nano-scale swimming machines that could have implications for biomedical applications

Scale plays a major role in locomotion. Swimming microorganisms, such as bacteria and spermatozoa, are subjected to relatively small inertial forces compared to the viscous forces exerted by the surrounding fluid. Such low-level inertia makes self-propulsion a major challenge. Now, scientists have found that the direction of propulsion made possible by such inertia is opposite to that induced by a viscoelastic fluid. These findings have been published in EPJ E by François Nadal from the Alternative Energies and Atomic Energy Commission (CEA), in Le Barp, France, and colleagues. This study could help optimise the design of self-propelled micro- and nanoscale artificial swimming machines to improve their mobility in medical applications.

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EPJ E Highlight - Refined biological evolution model

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Artistic impression symbolising population evolution. © elly99 | istockphoto.com

A new study accounts for species interactions, and adds a layer of complexity to previous minimalists models

Models for the evolution of life are now being developed to try and clarify the long-term dynamics of an evolving system of species. Specifically, a recent model proposed by Petri Kärenlampi from the University of Eastern Finland in Joensuu accounts for species interactions with various degrees of symmetry, connectivity, and species abundance. This is an improvement on previous, simpler models, which apply random fitness levels to species. The findings published in EPJ E demonstrate that the resulting replicator ecosystems do not appear to be a self-organised critical model, unlike the so-called Bak-Sneppen model; a reference in the field. The reasons for this discrepancy are not yet known.

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Ludwik Leibler awarded the EPJE Pierre-Gilles De Gennes Lecture Prize for 2014

Ludwik Leibler awarded the EPJE Pierre-Gilles De Gennes Lecture Prize for 2014. © CNRS Photothèque / Cyril FRESILLON
Ludwik Leibler awarded the EPJE Pierre-Gilles De Gennes Lecture Prize for 2014. © CNRS Photothèque / Cyril FRESILLON

The journal EPJE – Soft Matter and Biological Physics is pleased to honour Ludwik Leibler with the 2014 EPJE Pierre-Gilles De Gennes Lecture prize. Leibler is researcher at CNRS and Adjunct Professor at ESPCI ParisTech where he directs the Laboratory for Soft Matter and Chemistry. The Editors of the journal nominated him for his seminal contributions to polymer physics and the revolutionary polymeric materials, self-healing elastomers and vitrimers that he invented. This is the 4th edition of this prestigious prize, named after the Nobel laureate who founded EPJE. The prize consist of 1000 Euros and a plenary lecture that will be introduced by Daan Frenkel, co-Editor-in-Chief of EPJE. The EPJE Pierre-Gilles de Gennes lecture will be delivered July 22nd in Lisbon, during the 9th Liquid Matter conference of the European Physical Society.

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Editors-in-Chief
S. Giorgio and D. Jacob
ISSN (Print Edition): 1286-0042
ISSN (Electronic Edition): 1286-0050

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